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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38181579, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRARGWWL LCAAAALVAC ARGDPASKSR SCSEVRQIYG AKGFSLSDVP QAEISGEHLR  60
   61 ICPQGYTCCT SEMEENLANH SRMELETALH DSSRALQATL ATQLHGIDDH FQRLLNDSER 120
  121 TLQDAFPGAF GDLYTQNTRA FRDLYAELRL YYRGANLHLE ETLAEFWARL LERLFKQLHP 180
  181 QLLLPDDYLD CLGKQAEALR PFGDAPRELR LRATRAFVAA RSFVQGLGVA SDVVRKVAQV 240
  241 PLAPECSRAV MKLVYCAHCR GVPGARPCPD YCRNVLKGCL ANQADLDAEW RNLLDSMVLI 300
  301 TDKFWGPSGA ENVIGSVHMW LAEAINALQD NKDTLTAKVI QGCGNPKVNP HGSGPEEKRR 360
  361 RGKLALQEKS STGTLEKLVS EAKAQLRDIQ DYWISLPGTL CSEKMAMSPA SDDRCWNGIS 420
  421 KGRYLPEVMG DGLANQINNP EVEVDITKPD MTIRQQIMQL KIMTNRLRGA YGGNDVDFQD 480
  481 ASDDGSGSGS GGGCPDDACG RRVSKKSSSS RTPLTHALPG LSEQEGQKTS AATRPEPHYF 540
  541 FLLFLFTLVL AAARPRWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle