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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|191157
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTYAYYYTG IGAGVLIVAY IQVSFWCLAA GRQIHKIRQK FFHAIMNQEI GWFDVHDVGE  60
   61 LNTRLTDDVS KINEGIGDKI GMFFQAMATF FGGFIIGFTR GWKLTLVILA ISPVLGLSAG 120
  121 IWAKILSSFT DKELQAYAKA GAVAEEVLAA IRTVIAFGGQ KKELERYNNN LEEAKRLGIK 180
  181 KAITANISMG AAFLLIYASY ALAFWYGTSL VISKEYSIGQ VLTVFFAVLI APFSIGQASP 240
  241 NIEAFANARG AAYEIFNIID NKPSIDSFSK NGYKPDNIKG NLEFKNIHFS YPSRKDVQIL 300
  301 KGLNLKVQSG QTVALVGNSG CGKSTTVQLL QRLYDPTEGV VSIDGQDIRT INVRYLREII 360
  361 GVVSQEPVLF ATTIAENIRY GRENVTMDEI EKAVKEANAY DFIMKLPHKF DTLVGERGAQ 420
  421 LSGGQKQRIA IARALVRNPK ILLLDEATSA LDTESEAVVQ AALDKAREGR TTIVIAHRLS 480
  481 TVRNADIIAG FDGGVIVEQG NHEELMREKG IYFKLVMTQT AGNEIELGNE VGESKNEIDN 540
  541 LDMSSKDSAS SLIRRRSTRR SIRGPHDQDR KLSTKEALDE DVPPISFWRI LKLNSSEWPY 600
  601 FVVGIFCAIV NGALQPAFSI IFSKVVGVFT RNTDDETKRH DSNLFSLLFL ILGVISFITF 660
  661 FLQGFTFGKA GEILTKRLRY MVFKSMLRQD VSWFDNPKNT TGALTTRLAN DAGQVKGATG 720
  721 ARLAVITQNI ANLGTGIIIS LIYGWQLTLL LLAIVPIIAI AGVVEMKMLS GQALKDKKEL 780
  781 EGSGKIATEA IENFRTVVSL TREQKFENMY AQSLQIPYRN ALKKAHVFGI TFSFTQAMMY 840
  841 FSYAACFRFG AYLVARELMT FENVLLVFSA IVFGAMAVGQ VSSFAPDYAK AKVSASHIIM 900
  901 IIEKVPSIDS YSTGGLKPNT LEGNVKFNEV VFNYPTRPDI PVLQGLNLEV KKGQTLALVG 960
  961 SSGCGKSTVV QLLERFYDPM AGTVFLDGKE VNQLNVQWLR AHLGIVSQEP ILFDCSIAEN1020
 1021 IAYGDNSRVV SQDEIERAAK EANIHQFIES LPDKYNTRVG DKGTQLSGGQ KQRIAIARAL1080
 1081 VRQPHILLLD EATSALDTES EKVVQEALDK AREGRTCIVI AHRLSTIQNA DLIVVIQNGK1140
 1141 VKEHGTHQQL LAQKGIYFSM VSVQAGAKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle