YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|166951
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTRLLLPI SILWFCFYSS HTILQKDPLL ICVNGDPGFD QRAYPTYFGP ILDEFSSIMG  60
   61 FEPSILSLER FNPVGGPETS PDTDISVDDF GARGDGTDDT KAFEKAWKDA CSSGSVLIVP 120
  121 ENKNYLLKQI TFSGPCKSDL RVKIRGTIEA SSDQSDWVGH NRKRWIEFED ISNLTLEGGG 180
  181 TINGNGETWW DSSCKRKKSL PCKSAPTALT FRSCKNLIVS DLSIKDSQKM HLSFDKCQDV 240
  241 IASNLMVTAP EHSPNTDGIH ITGTQRIHVM NSVIGTGDDC ISIESGSKMV IATNITCGPG 300
  301 HGISIGSLGD RNSEAHVSGV LVDGGNLFDT TNGLRIKTWQ GGSGSAKNIK FQNIVMHNVT 360
  361 NPIIIDQYYC DSKDPCPEQE SAVKVSNVAY MNIRGTSASE VAVKFDCSKS SPCQGILLEN 420
  421 INLVGNGGKE TTMSCSNIVQ GTTEGKVYPP SCL

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	453	0.99