YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229903850, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMELQHQRL MALAGQLQLE SLISAAPALS QQAVDQEWSY MDFLEHLLHE EKLARHQRKQ  60
   61 AMYTRMAAFP AVKTFEEYDF TFATGAPQKQ LQSLRSLSFI ERNENIVLLG PSGVGKTHLA 120
  121 IAMGYEAVRA GIKVRFTTAA DLLLQLSTAQ RQGRYKTTLQ RGVMAPRLLI IDEIGYLPFS 180
  181 QEEAKLFFQV IAKRYEKSAM ILTSNLPFGQ WDQTFAGDAA LTSAMLDRIL HHSHVVQIKG 240
  241 ESYRLRQKRK AGVIAEANPE

Type	Start	End	Confidence
Signal Peptide	1	25	0.58
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	260	0.99