YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|208730575, gi...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKQHQRGFT LLEIMVVIVI LGVLASLVVP NLMGNKDKAD RQKVMSDLVA LESTLDMYRL  60
   61 DNNRYPTTEQ GLRALVSKPT VQPEPRNYRQ DGYIRRLPQD PWGGDYQLLN PGQYSDIDIF 120
  121 SPGPDGVPNT EDDIGNWTLG NAQP

Type	Start	End	Confidence
Cytoplasmic	1	8	0.57
Transmembrane Helix	9	29	0.68
Non-Cytoplasmic	30	144	0.84