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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG9_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG  60
   61 ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS LGFIICFSGF FLLYVDWNGL 120
  121 QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ 180
  181 LKDTLDFRHF YYNNLHVTDN EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR 240
  241 KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD 300
  301 CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR 360
  361 RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS PIISIIAKFV SFVSGGFAAV 420
  421 LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH 480
  481 YMPKRWRGKE NKDDVRLELE TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK 540
  541 DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW 600
  601 ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD 660
  661 SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT ANQNATDCWP PDLGIRGEDS 720
  721 RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT 780
  781 NSFIEPPDFI NRYTAGNLLD NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE 840
  841 AGIDLHFDDV YSSRPQETST SSTTLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle