YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149674, gi|22...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVLGKTNV TDTVSQTDLD QVTTLQADRL GIKSIDGLEY LNNLTQINFS NNQLTDITPL  60
   61 KDLTKLVDIL MNNNQIADIT PLANLTNLTG LTLFNNQITD IDPLKNLTNL NRLELSSNTI 120
  121 SDISALSGLT NLQQLSFGNQ VTDLKPLANL TTLERLDISS NKVSDISVLA KLTNLESLIA 180
  181 TNNQISDITP LGILTNLDEL SLNGNQLKDI GTLASLTNLT DLDLANNQIS NLAPLSGLTK 240
  241 LTELKLGANQ ISNISPLAGL TALTNLELNE NQLEDISPIS NLKNLTYLTL YFNNISDISP 300
  301 VSSLTKLQRL FFYNNKVSDV SSLANLTNIN WLSAGHNQIS DLTPLANLTR ITQLGLNDQA 360
  361 WTNAPVNYKA NVSIPNTVKN VTGALIAPAT ISDGGSYAEP DITWNLPSYT NEVSYTFSQP 420
  421 VTIGKGTTTF SGTVTQPLKA IFNAKFHVDG KETTKEVEAG NLLTEPAKPV KEGHTFVGWF 480
  481 DAQTGGTKWN FSTDKMPTND INLYAQFSIN SYTATFENDG VTTSQTVDYQ GLLQEPTPPT 540
  541 KEGYTFKGWY DAKTGGDKWD FATSKMPAKN ITLYAQYSAN SYTATFDVDG KSTTQAVDYQ 600
  601 GLLKEPKAPT KAGYTFKGWY DEKTDGKKWD FATDKMPAND ITLYAQFTKN PVAPPTTGGN 660
  661 TPPTTNNGGN TTPPSANIPG SDTSNTSTGN SASTTSTMNA YDPYNSKEAS LPTTGDSDNA 720
  721 LYLLLGLLAV GTAMALTKKA RASK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle