YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EG11295
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQPMPGKPA EDAENELDIR GLFRTLWAGK LWIIGMGLAF ALIALAYTFF ARQEWSSTAI  60
   61 TDRPTVNMLG GYYSQQQFLR NLDVRSNMAS ADQPSVMDEA YKEFVMQLAS WDTRREFWLQ 120
  121 TDYYKQRMVG NSKADAALLD EMINNIQFIP GDFTRAVNDS VKLIAETAPD ANNLLRQYVA 180
  181 FASQRAASHL NDELKGAWAA RTIQMKAQVK RQEEVAKAIY DRRMNSIEQA LKIAEQHNIS 240
  241 RSATDVPAEE LPDSEMFLLG RPMLQARLEN LQAVGPAFDL DYDQNRAMLN TLNVGPTLDP 300
  301 RFQTYRYLRT PEEPVKRDSP RRAFLMIMWG IVGGLIGAGV ALTRRCSK

Type	Start	End	Confidence
Cytoplasmic	1	28	0.90
Transmembrane Helix	29	51	0.91
Non-Cytoplasmic	52	322	0.93
Transmembrane Helix	323	343	0.92
Cytoplasmic	344	348	0.75