YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|209158708, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMLRFLNQC SQGRGAWLLM AFTALALELT ALWFQHVMLL KPCVLCIYER CALFGVLGAA  60
   61 LIGAIAPKTP LRYVAMVIWL YSAFRGVQLT YEHTMLQLYP SPFATCDFMV RFPEWLPLDK 120
  121 WVPQVFVASG DCAERQWDFL GLEMPQWLLG IFIAYLIVAV LVVISQPFKA KKRDLFGR

Type	Start	End	Confidence
Cytoplasmic	1	14	0.76
Transmembrane Helix	15	37	0.88
Non-Cytoplasmic	38	45	0.63
Transmembrane Helix	46	66	0.89
Cytoplasmic	67	72	0.62
Transmembrane Helix	73	91	0.68
Non-Cytoplasmic	92	146	0.93
Transmembrane Helix	147	168	0.91
Cytoplasmic	169	178	0.95