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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|742875, gi|29733
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRDECKKHL AGLGALGLGS LITELTANEE LTGTDGALVN DEGWVRSTED AVDYSDINEV  60
   61 AEDESRRYQQ TMGSLQPLCH SDYDEDDYDA DCEDIDCKLM PPPPPPPGPM KKDKDQDSIT 120
  121 GEKVDFSSSS DSESEMGPQE ATQAESEDGK LTLPLAGIMQ HDATKLLPSV TELFPEFRPG 180
  181 KVLRFLRLFG PGKNVPSVWR SARRKRKKKH RELIQEEQIQ EVECSVESEV SQKSLWNYDY 240
  241 APPPPPEQCL SDDEITMMAP VESKFSQSTG DIDKVTDTKP RVAEWRYGPA RLWYDMLGVP 300
  301 EDGSGFDYGF KLRKTEHEPV IKSRMIEEFR KLEENNGTDL LADENFLMVT QLHWEDDIIW 360
  361 DGEDVKHKGT KPQRASLAGW LPSSMTRNAM AYNVQQGFAA TLDDDKPWYS IFPIDNEDLV 420
  421 YGRWEDNIIW DAQAMPRLLE PPVLTLDPND ENLILEIPDE KEEATSNSPS KESKKESSLK 480
  481 KSRILLGKTG VIKEEPQQNM SQPEVKDPWN LSNDEYYYPK QQGLRGTFGG NIIQHSIPAV 540
  541 ELRQPFFPTH MGPIKLRQFH RPPLKKYSFG ALSQPGPHSV QPLLKHIKKK AKMREQERQA 600
  601 SGGGEMFFMR TPQDLTGKDG DLILAEYSEE NGPLMMQVGM ATKIKNYYKR KPGKDPGAPD 660
  661 CKYGETVYCH TSPFLGSLHP GQLLQAFENN LFRAPIYLHK MPETDFLIIR TRQGYYIREL 720
  721 VDIFVVGQQC PLFEVPGPNS KRANTHIRDF LQVFIYRLFW KSKDRPRRIR MEDIKKAFPS 780
  781 HSESSIRKRL KLCADFKRTG MDSNWWVLKS DFRLPTEEEI RAMVSPEQCC AYYSMIAAEQ 840
  841 RLKDAGYGEK SFFAPEEENE EDFQMKIDDE VRTAPWNTTR AFIAAMKGKC LLEVTGVADP 900
  901 TGCGEGFSYV KIPNKPTQQK DDKEPQPVKK TVTGTDADLR RLSLKNAKQL LRKFGVPEEE 960
  961 IKKLSRWEVI DVVRTMSTEQ ARSGEGPMSK FARGSRFSVA EHQERYKEEC QRIFDLQNKV1020
 1021 LSSTEVLSTD TDSSSAEDSD FEEMGKNIEN MLQNKKTSSQ LSREREEQER KELQRMLLAA1080
 1081 GSAASGNNHR DDDTASVTSL NSSATGRCLK IYRTFRDEEG KEYVRCETVR KPAVIDAYVR1140
 1141 IRTTKDEEFI RKFALFDEQH REEMRKERRR IQEQLRRLKR NQEKEKLKGP PEKKPKKMKE1200
 1201 RPDLKLKCGA CGAIGHMRTN KFCPLYYQTN APPSNPVAMT EEQEEELEKT VIHNDNEELI1260
 1261 KVEGTKIVLG KQLIESADEV RRKSLVLKFP KQQLPPKKKR RVGTTVHCDY LNRPHKSIHR1320
 1321 RRTDPMVTLS SILESIINDM RDLPNTYPFH TPVNAKVVKD YYKIITRPMD LQTLRENVRK1380
 1381 RLYPSREEFR EHLELIVKNS ATYNGPKHSL TQISQSMLDL CDEKLKEKED KLARLEKAIN1440
 1441 PLLDDDDQVA FSFILDNIVT QKMMAVPDSW PFHHPVNKKF VPDYYKVIVN PMDLETIRKN1500
 1501 ISKHKYQSRE SFLDDVNLIL ANSVKYNDNE CSSKANDIVC LIQYCSSQIE ELRF

YRC Informatics Platform - Version 3.0
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