YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|414664, gi\|739457
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSWPGLFWL LTLALLADGG RRESQLRIGK AINIFLRYGY LGISMRVIPL NDNSEPDRWV  60
   61 FKEPTKNIYR NLSGLAESHE DTTLGIFHGD FHMEFCENRR QLFQAYFRDF SIERMDKPWE 120
  121 AFTGGWFPDN AAKKLGINTS FIQGDYSYVL VRVVRFRETG RLNAEIPVHQ PLEPDVRSRM 180
  181 DQLQIGNITS AVRFMEDVGT HYVNSYTTGN SLYQVFVYSR KNYSMIKERI KSKGLNGLSK 240
  241 LDLYNYFAPW FAAHLGQIRS ASANATVERW ARRKLQYEYY VVKYVTLLKL HGNSTLLRSL 300
  301 DSLLGNDAIL QLDLKSLKPI FREEPEKESW YHEVLDNNVK LWELNMPQSH PTR

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	353	0.99