YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|234848, gi\|228203
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVPTVIPG IVHCWMIHCL IGPFLFAIIY WSIFIEGMLF PQKYLDCQSV INLLCGSNQQ  60
   61 KRIFKEKLRI YQVHIQEKIG CSEFNTLLLI YQLGSRHKIN RQINDLLCNL CSKNHMIYAI 120
  121 ICRNHYLLFF SFVLSATIFL RGSLL

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.67
Transmembrane Helix	12	34	0.90
Cytoplasmic	35	121	0.73
Transmembrane Helix	122	144	0.80
Non-Cytoplasmic	145	145	0.74