YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169057, gi\|227784
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSSINGFS LSSLSPAKTS TKRTTLRPFV FASLNTSSSS SSSSTFPSLI QDKPVFASSS  60
   61 PIITPVLREE MGKGYDEAIE ELQKLLREKT ELKATAAEKV EQITAQLGTT SSSDGIPKSE 120
  121 ASERIKTGFL HFKKEKYDKN PALYGELAKG QSPPFMVFAC SDSRVCPSHV LDFQPGKAFV 180
  181 VRNVANLVPP YDQAKYAGTG AAIEYAVLHL KVSNIVVIGH SACGGIKGLL SFPFDGTYST 240
  241 DFIEEWVKIG LPAKAKVKAQ HGDAPFAELC THCEKEAVNA SLGNLLTYPF VREGLVNKTL 300
  301 ALKGGYYDFV KGSFELWGLE FGLSSTFSV

Type	Start	End	Confidence
Signal Peptide	1	43	0.85
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	329	0.99