YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|72475, gi|200330
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDVSKINEGI GDKIGMFFQA MATFFGGFII GFTRGWKLTL VILAISPVLG LSAGIWAKIL  60
   61 SSFTDKELHA YAKAGAVAEE VLAAIRTVIA FGGQKKELER YNNNLEEAKR LGIKKAITAN 120
  121 ISMGAAFLLI YASYALAFWY GTSLVISKEY SIGQVLTVFF SVLIGAFSVG QASPNIEAFA 180
  181 NARGAAYEVF KIIDNKPSID SFSKSGHKPD NIQGNLEFKN IHFSYPSRKE VQILKGLNLK 240
  241 VKSGQTVALV GNSGCGKSTT VQLMQRLYDP LDGMVSIDGQ DIRTINVRYL REIIGVVSQE 300
  301 PVLFATTIAE NIRYGREDVT MDEIEKAVKE ANAYDFIMKL PHQFDTLVGE RGAHVSGGQK 360
  361 QRIAIARALV RNPKILLLDE ATSALDTESE AVVQAALDKA REGRTTIVIA HRLSTVRNAD 420
  421 VIAGFDGGVI VEQGNHDELM REKGIYFKLV MTQTAGNEIE LGNEACKSKD EIDNLDMSSK 480
  481 DSGSSLIRRR STRKSICGPH DQDRKLSTKE ALDEDVPPAS FWRILKLNST EWPYFVVGIF 540
  541 CAIINGGLQP AFSVIFSKVV GVFTNGGPPE TQRQNSNLFS LLFLILGIIS FITFFLQGFT 600
  601 FGKAGEILTK RLRYMVFKSM LRQDVSWFDD PKNTTGALTT RLANDAAQVK GATGSRLAVI 660
  661 FQNIANLGTG IIISLIYGWQ LTLLLLAIVP IIAIAGVVEM KMLSGQALKD KKELEGSGKI 720
  721 ATEAIENFRT VVSLTREQKF ETMYAQSLQI PYRNAMKKAH VFGITFSFTQ AMMYFSYAAC 780
  781 FRFGAYLVTQ QLMTFENVLL VFSAIVFGAM AVGQVSSFAP DYAKATVSAS HIIRIIEKTP 840
  841 EIDSYSTQGL KPNMLEGNVQ FSGVVFNYPT RPSIPVLQGL SLEVKKGQTL ALVGSSGCGK 900
  901 STVVQLLERF YDPMAGSVFL DGKEIKQLNV QWLRAQLGIV SQEPILFDCS IAENIAYGDN 960
  961 SRVVSYEEIV RAAKEANIHQ FIDSLPDKYN TRVGDKGTQL SGGQKQRIAI ARALVRQPHI1020
 1021 LLLDEATSAL DTESEKVVQE ALDKAREGRT CIVIAHRLST IQNADLIVVI QNGKVKEHGT1080
 1081 HQQLLAQKGI YFSMVSVQAG AKRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle