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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|227176456, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVIIGGVA GGMSAATRLR RLMEDAEIVV MEKGPFVSFA NCGLPYYVSG EIAEREQLLV  60
   61 QTPEALKARF NLDVRPHHEV VAIDPIEKVI TVKHETEILT EHYDKLILSP GAKPFVPPIT 120
  121 GLAEAKNVFS LRNVPDLDQI MTALTPETKR AVVIGAGFIG LEMAENLQKR GLEVTLVEKA 180
  181 PHVLPPLDEE MAAFVKAELS KNNVQVITGQ SAVAFEEEGQ VIRLEDGQTL ASDLTILSVG 240
  241 VQPENTLAVE AGVATGLRGG IVVDEHYQTN QPDIYAVGDA IVVKQQITQE DALISLASPA 300
  301 NRQGRQVADV IAGLERKNQG SIGTAIVRVF DLTAASTGLS ERAAKAAGLT TAVVHISGKD 360
  361 HAGYYPGATD LQLKLVFHPT TGEIYGAQGI GAKGVDKRID ILATAIKGQL TIFDLPELEF 420
  421 TYAPPFGSAK DPVNMLGYAA MNLVEGLSEN VQWYELSNEL ANGAVLLDVR NPAERANGQF 480
  481 KNAVSIPLNE LRERLEELDK STEYIVSCHS GLRSYIAERM LKQAGISAKN LDGAFALYRM 540
  541 VKPEELENV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle