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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46125733, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRQLALGVT AKPWMRISPH HVRSVHSTVK DQKRKAPAPA NRDFSTNAKK QSEAAASATT  60
   61 KSSSPSSLRL SQDDLFHPFS KSPVPEFRQR AAFMRQHAYC PHPDHQQTKL PTIAPKPEDA 120
  121 EAANGTQPPE HVNFECPDCG LPVYCCEEHW MDDYEKHLEV CDTLRQINED DHDLRSGRVF 180
  181 EEGNLPDLQM EHAAINMTNW DTFMYTREFD AVNSDRQMRQ ITRLLTYPVT IGSVLHELSP 240
  241 YSIKAGERVT TEGLKSFSAL RYNLHPPKSG RGIGVGELKP EAPAVRVFIL GARAESSLPR 300
  301 PAWVQLAHMF PDARLHLIFV GPESMANRDD EFPLPERTPS NPFGAVVEDR VWYKMKISTI 360
  361 VDYYHTIHQT QHFAPYDPYF DCFVLFHPGL GHPASSHEWE ETLPLLLETK VPIISTGYTQ 420
  421 FDMERDVEWV NKKSKGEFDI LLQPGENTFR SLRWDLNDMD PQDVSCGNWG VWAFRGKSGN 480
  481 SPITLAMTAT SSVAPAVSPA RPPAPRPKSV TFDTEPPPST ATSSAATTTT TASSRRSTRP 540
  541 NTTDPLSDRA TSLLIRRTLC SPQLGDKGRD AQVPIDELLP PLTSRNDVDL QLYAILAIVL 600
  601 REFVQSWYNK ITTDENFVAE VLHIIAHCSR ALEQRFRKVD IETLVLDEIP DLLDKHITSY 660
  661 RISHSTIARA PVEVDPREAY HAMCPLPHLA PVPHPDKPDT ISDQAGNEAL YRQLLVQGIL 720
  721 AILLPTEDLE NPCLTSLVEQ IFSELIIGNI IANKASQPWM LYEGICITAR VLRQKKDEGP 780
  781 SPVGTQKETS ESKLEVKGRR AWSVRSSVRS IFLGVIQLGM VVVASLRFIS TALVMASSLP 840
  841 ARTTPIDEKE VLLGQDKHSS VSSSHESSDY IKAPILSCRV WTCLGNLLEL SLRMPWLDGF 900
  901 LSLLQYGAVN GPGRIAGHDG PVDRHFHLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle