YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM21_GIBZE
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPTTNLLVT RSTAFRGVPT TLRPFLASRY YATQQGLGAT PRGPKRRAVT PFNDNGHVPW  60
   61 KQLSVAEKAA RATQQSFNFG MILVGLMLTG GVGYFLWTDV FSPDSKISNF NRAVDKIRSD 120
  121 PRIIDVMGDS KKIAAHGDET FNKWRRARPV ASSETTDARG DQHIMMHFYV EGPKNNGVAR 180
  181 LHMIKYRGHS DFEYKYLFVD VKDHERIYLE HEDSSSKNGK KFSLFGVKW

Type	Start	End	Confidence
Cytoplasmic	1	76	0.94
Transmembrane Helix	77	98	0.92
Non-Cytoplasmic	99	229	0.96