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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42554669, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEARASIW ARLKAVKPPF VSKKPHFNFI SIHYTWIIGA TLCASVIIYG SGRGQTSYID  60
   61 SLMFASGANT QAGLNPIDVN LLNTFQQVVV YFFTLTSNPI TLHTSVVFLR LYWFEKRFQG 120
  121 WVTDARQRRA TISKAKTRPR NDDRQNEEGV NGRHITIVPP QGRRQRITND GILLDGSEAY 180
  181 QSQAIVDDDD DNDHQRRQPP PASSDESDTV SAGRSNSIEL SPLEKPGQAH HDNRDEWKEE 240
  241 QSRTQNTPSG IKFAETVKRS DGVDDDLTKF PQRRTHAEHI AILERQRNQD NEVLRIPGPR 300
  301 ETERGLGPRR LEEDDGDDDN NTIAMTRTVE SRPDHATIDS RGPPGRRPTI VIAEPKRPLK 360
  361 HELTDDARAI GGTLDAIRMR KPRILNRGQK ETHDDGDSTM SRAFRTRTID TIRSALTNDH 420
  421 TKDMPYLSYT PTMGRNSNFV GLTLEQREEL GGIEYRSLRT LAVILLSYFW GFQLIAVTFL 480
  481 LPWILHTEKY GRIVEASAVS RTWWGFWTAN SAFNDLGLTL TPDSMNSFNT SEYIMMIMWF 540
  541 FVIIGNTGFP VMLRFVIWVL SRLVPTNTGL WEELRFLLDH PRRCFTLLFP SSANWWLFWI 600
  601 LVALNAIDLL FFVVLDLNSG PVAQLPVHTR IADGLFQAAS TRTAGFSCFS LSDLHPALPV 660
  661 LYMIMMYISI FPIAISIRRT NVYEEKSLGV YSSKKDDDEE ESASALNYVG THLRRQLSFD 720
  721 LWYVFVGFFL LAISEGGSLK AKDFNLFDIL FEVISAYGTV GLSMGVPNVN ASLCSQFTVV 780
  781 GKLIIVAMQI RGRHRGLPYG LDRAVLLPSE ARFQKEAEEN QPILIRTRTN ASMGAASGME 840
  841 PPSSPGFPGR RGSASRFRER ANSRIISQFL YPGPVIPSNE IHGHKRATSN NSNNTRDFPR 900
  901 FNTEPVFEEE KDEVPPLRPI ESHQFTPRRA ETG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle