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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42554662, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVFRASSSP SSTKTPVALS PASLCRFHWP TVSEFPLDVW SLRRFFSFFS PLTINDSSNS  60
   61 FARCRSITHY DESETDDDFT DITFFDPSHS LSIAEKSLAT SRNRRIPSFS VSGSVFHQHP 120
  121 LRALPVSAQP QPELQRQKHI QRDLAISPER GRLGGRADNL FPTDSLLSRP PTNPVPPALD 180
  181 APGNTLILSL DPPEPAYPRT GSSSGRAAAL NSRQQPGRTA DGRQPSAFHP SPFRPQKATG 240
  241 TAHRARRLSA ARLWNPTNST PRPHTKPESS RKRRPSTPPP PSIPLLHPTF DHRAPPDSLG 300
  301 AGPSDYPLLT LSEQHQIKHS LSPRASLQVD RAGSSDRRIS LPNSVRASYD EKGSRRGAVS 360
  361 AEEYRLSREL LAQGSVVEHP VVKIDKGKGK AVMMPENTDP MPSYGTDLER GPDIMDPRMS 420
  421 NVSAGDGIGS ALSTTNSSIM GEEVEPDAAG EWGPQHPCYP HRNPHVPVDS PEYTSTRIIR 480
  481 IRRDWLIKGD LAPTFSNLYP EILDPAGLSE QEFRRIIEKL NGELVPAFDP YSARNIIDSL 540
  541 LGLVTGWVWD DMGLTGAKSR LNNLEKWIEQ WNCEMEKTMG AEDGVMPPKI MPLRQTGYMT 600
  601 LDIQIPDPEI MPAPSTANPN ESRTALPMTP SSAIVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle