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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46126151, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQSVTELG LAEYAPPCVQ VQFNQLRSGS TQPRIGLSYH QPGAVGPYHR DLDTSQTEIM  60
   61 SRLLTAGLRP LPRRATVLPV RNLHLHRQST GGLLQADAAI RATRKRMWQG GNNAFHNAVT 120
  121 TRNASFARFL PKLMVKFLRV PAMFGGVAIG AFAWVQYQAA QAGTFAVNLF NTTTDTVSSA 180
  181 ASSIFGGAKD IADQVNRGWE STKEKAELPD WVKQILKLQE DIGTGGSGGP GGGEPKQSKV 240
  241 GAAAAVGATA AAYGYDQSDD EDPRNVEQVA KDDQMMLLTK KMIEIRSILQ KVGQSSTLTL 300
  301 PSIVVIGSQS SGKSSVLEAI VGHEFLPKGS NMVTRRPIEL TLVNTPSAKE EYGEFPDLGL 360
  361 RHITDFSSIQ RTLTELNLAV PDSQCVSDDP IHLTVYSPNV PDLSLIDLPG YIQVVGQNQP 420
  421 LELKQKISEL CDKYIQPPNV ILAISAADVD LANSTALRAS RRVDPRGERT IGVVTKMDLV 480
  481 DPVRGANILN DQQYPLRLGY VGVISKAPQN QGLFKMGNTN RLAQISKQEK TFFDAHPREF 540
  541 GPGAEVSVGT KTLRKKLMHV LEKTMSGSLQ STSDAIRQEL EEATYEFKVQ YNDRPLSAES 600
  601 YLAESLDAFK HSFKQFAEEF GRPQMQELLK LELDQKVLDL LAARYWNKPI EDLSPINPDL 660
  661 DNLADLPKAP ADSLYWQRQL DASASALTKL GVGRLATTAV ASSIQAHIDS LISNSSFASH 720
  721 PFARQAILES AETILRERFY STSDQVENCI KPYKFEIELE DREWAKGRDH VGGVLKKELQ 780
  781 DCEKALKGLE DSVGGRRKIK DVMNYIDKAR KGEVVVEGDN RSGAGGFSAA LLSKGREAVF 840
  841 LRDRADIIKM RLLAVKSKQC ADPNNKYYCP EVFLDAAATK MASTAVLFLN VELLSEFYYS 900
  901 FPRELDHRLG RHLSDEEIEK FAKEDPKIRR HLEVIRRKEL LELVLEKMES LRQLDGRERE 960
  961 RTNPNARRDR KQGRWGLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle