YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46126127, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLQILASAL ALSGSAAAFS DSWPLVMFST SKFSDATSNN QIQTRSQALE QVKDLLTSCP  60
   61 TDNYVLIAQE GANAADIRRT NANSNLHQAI ARKEIQGKFI VSEVVGESID ADAIQDYIQT 120
  121 ACYEQAKKVE PHFTLIKAGD DKEATEKWIS NEQWMKDSYT VMFVGTPSTK AKAASASKKV 180
  181 SGSEKTIYES EFIEPLHMDL KRDVSEGSKA GNTTRDTRGL FEKYQFFTPG IFMAIITAIV 240
  241 LFSILGVGLR ALASLEVSYG SFEKDMGPAA QKKQ

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	229	0.99
Transmembrane Helix	230	249	0.93
Cytoplasmic	250	274	0.91