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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42554592, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPNASISRL PISRKTYILT LVLSLFLCAF GNAHASELLH DSIFDAETHI ERSDASNLIY  60
   61 EPDFGAFDRS ILGRAPAEQS LLTNNGPDSR KLSPGATVCY VVDKKTLFGK DKRDDDGHEP 120
  121 RNAEDDPGHQ NFRRAESKTV YISVNTCSRP TMKSKDKDNN PETAPQLSLY TSMSSKIKCP 180
  181 DSSNYNKTNS DLKRIPFDEG AAMVTVNATD AIYISVAAPN ITKKHDGDWE YQIAISFDEY 240
  241 YHNYDSQNGT ARLLLMDTDS TSALLVTSNL TEDSSETQQI MKRPPPYQLF VGDEKLRSID 300
  301 GLRHSACGLK QSAEIWANSN RTGRHNDLVT TGVTTRGPGQ LPKQQFLIAG LNHSSSYLGI 360
  361 LVKMPEGNGK RAETTGGGGT VYRATSFETS SSSNCKMVTN LDFCNETQYA VPGNDKKFNN 420
  421 TALAKHYDDY ARKMYANFEK VMMQMPCETT PESLYSLVRN CDECRAAYKR WLCTVTIPRC 480
  481 EDVMGGSRFS VVRNAFQAFP NGTTLPDNFR KGLNSSANNS SRNAWIDETV KPGPYKELLP 540
  541 CQDICYDVVQ SCPSAIGFTC PQPGFPSFDV SYGERNSDTS SITCNYPGEA RTKISAARVI 600
  601 RPGTFMLGVV SLMMWLAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle