YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42554222, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASSRGGRA VKAVLSTSPN VCARCASSSS SALPRIPARL YSSSIAAAVA KTPTDATPPS  60
   61 TAPNSPPYDV RSGVILTRPP LVTRTLHPFE NAFFFYQKRL EERLNTPFIT GIYFKPDTAR 120
  121 RLDWNIKVQE RQGTVAKELG VYHGKSSKAW DDELKVGDEL SNQETIVKSL LKDAESRVSD 180
  181 DAEVIPSEDV IPVDPPADRV TEADRKGDVQ RLDRQLDRTL YLVVKGKDGW GFPADVIPKD 240
  241 ENLHESAKRV LDQAAGVNMN TWLVSRIPVA HVVSRPKLSK EGVVEKKGEK TFFIKGRIMA 300
  301 GQADLKDNPF GYTEFKWLTR EELEKELPKT YFKGVRNMMT DRTMKMSRRI ILGPCMY

Type	Start	End	Confidence
Signal Peptide	1	25	0.77
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	357	0.99