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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42554158, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQPSASSS TAPATGPASA AGSEKDAHSS TPSSDIPVRS KESFDKLMVE RFITRDAIAA  60
   61 AALGGQLDQT RKIMSDTRDK IQEYRQVRTD YRQWFPPSKL YGEGYNGFGN GYTENQGASR 120
  121 IIYPSQKSRP GQRTTPPFKY KRKDMLKQAE QHEELVPLRL EVEWDKIKLR DTFTWNLHER 180
  181 LLHVELFAAQ LVEDMGLKPP VSQPVYEQVV HQMREQLNDF YPLVYSEDDA LDPELPYSAY 240
  241 KNDEMRVLIK LNITIGQHTL VDQFEWEINN PSNSPEDFAA NMARDLSLSG EFTTAIAHCI 300
  301 REQTQLFTRS LYSVGHPFDG RPIEDPDLVG AFLQTPLPNV FRPQQQAKDY APYLYELSEA 360
  361 DLERNETIFS REQRRQKRSI NRRGGPQLPD LRERQRTIRT LVVSSVLPGA AATIDESRLY 420
  421 KRAAGPRTKR PIRDGDLSES DDSEDSGPDS PAPSQITGGT ARTRGMRGAA SAAQQRMANL 480
  481 GRSETPEASA IAHHHETRTS RRFREETEEP SQLIVTLKLS SDKLRRLMNR DYSDLTAPSH 540
  541 ASVAFPRAPS ASTPSRSMPP PPSTPSSVPP HASMTPSSSL PPGQIGRLPA PPTIPGQSAS 600
  601 IPQFVLTEPL PQPPPPEWLV NALKELEKTY NRGDRFEAMM KYSYLDPVTE LPIQGQPLPE 660
  661 GVKYAWLPRI RCLDCTNKLY TPGPDMTVRK FEAHLEFSGH KNAVAKRVAR EANP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle