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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46134287, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEHLPNKQK GRERDRIKRT KDGVTQLPRK KFYRQRAHAN PFSDHMLEYP KSPDHMDWSP  60
   61 YFPHYVQEGT SEDSSKPPRL TKDVEIVDIG CGFGGLTVAL APKMPDTLTL GLEIRTQVAG 120
  121 YVQERIKALR SQNSDNMYQN VACIRANTMK FLPNFFRKAQ LSKIFICFPD PHFKARKHKA 180
  181 RIVSTTLNSE YAYALRPGGI VYTITDVEDL HLWMVQHLEA HPAFERISKE EEEADECVHV 240
  241 MSTETEESKK LVQSGLDLHY LLSHHRLYHL HPSIFVQECG FEVNIPVMAL KRRDVIVAGL 300
  301 AAFIAWGFAA SWSPVLRWAG HAFVAGSLVT LVLLLTGLFL VSRRPNDRTL PPNGVTFLNP 360
  361 KSWRSEVQAL RQRQSYTPTQ IQPESPRVSK AIDDLLGLIV RDFVSSWYSN ISRNPTFTNQ 420
  421 VDKAVREALL SLCDILRDKD LADLVTSRLV PLLTAHFRDF YEAEKSIRGK KLNRSVTESE 480
  481 ELDLAIASKF RDGRLHPAAS LSFPDTKMVQ QDYLRSLVAK IMPQILPGNM LSSRAVSIII 540
  541 REIVGCSVLF PVIQLLSEPD TWNQLMENMG RSMLQDRSTV RKLRAALDQH APSTPRSNKV 600
  601 ASMPRVAPGD SERKFEKFIR AIRKVNNLSD ARRFRSEVAS QLKRDSLQDN QDQVYLRRLE 660
  661 MGKRLLDQRV THLAAGGERR PPGPLPLPST SSKSKLESAP LVDFLRDPSA LSYFMEYMDR 720
  721 QNLMPLVQFW LVVDGFRNPL EEDGHDDELP STLPMWTDSD RQDLQQINQA YLSRSELKVP 780
  781 DHSKNEVKEF IKAGKTATPM QYYRARQAIL KAQSAVLEEM RARFFQGFKK SDLFYKCLAA 840
  841 EEAANNQTLR STPQPEAQTL APGRTSKTLP AKPRPVSRLT TQLSNTSKRT GSASDLRSLN 900
  901 FNGNGHGHRS RRSLDEGSLT PLFDDDDIDT DGLGDSVQSL DAESNSQQLP DTQVVQAVEE 960
  961 ALTNILENDR PQTAEDLRAS LFENGGSSSI GGLDDNASSL FSGHDNESHR GSLDMGLRPG1020
 1021 ALVKEGEKPS LSSLGLVSAA SRIGVFVDDD LFGDENKDLP DDGDPDEGPP PDDEDEVHEA1080
 1081 APGDLGLAEA ITALSNDIDR LVAQEAVVES LTRKAELTNN TAELRILRKS KASLQREIRR1140
 1141 KELQRQQYVI QESDNSLYGR STIKIKSIQV GREEDGREFA LYVIEVQRNA GEQMPAASWV1200
 1201 ISRRYSEFHE LHQKLRSRYP SVRNLDFPRR RMVMKFQSEF LRKRRTALEQ YLQDLLLLPE1260
 1261 ACRSRELRAF LSQSVITQGQ DILDREDKKD MMTRLYDSVA DGMDDILGNI PVLDQISEAG1320
 1321 QSLIAAATNQ LNTVPLNVNE ENFPAAEAEA ELNAFENKEL EPFIKPICDI FLEIFELNKG1380
 1381 NNWLRGRAVV VVLQQLLGGT IERKVRDNVK MLAQDENVLK CISLVQDSLW PGGELQRDRK1440
 1441 PRTAAEKKKT RTEASLMLAT LVPDLAGSVV GRVNAQAASR RIFATLNNSR LKYDIR

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