YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42554079, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADAVIYHP TVAHYLRYMA TTLGRDKLMR VFQYFARFYA WYLLRGNATA DKVAPWNALK  60
   61 KQFGLFRKVF RAGKFVEHLK AAATASDSKS MDPVLKYTQV GRQLGYAGYL ACDSLTIPHA 120
  121 AGIKTWKHAT RMQHEAYRSW AVGIAFSILG QLYTLRQLSA RASKVDLKEG EGVVESKTIS 180
  181 IERAAAKKQL LCDVCDILSF IGGLGYNKYL DDGVVGLTGT LSSIIGVYTQ WKKTA

Type	Start	End	Confidence
Cytoplasmic	1	135	0.65
Transmembrane Helix	136	155	0.66
Non-Cytoplasmic	156	235	0.81