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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46127169, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLPSSIFI WWQGISQTST TTSQAFIDQI RSIWEQRKFR YGLLIISATS NAAFSSPLVA  60
   61 TPLAGKNKTP GKRMPTPSSI DRLHKPFKCP GAAGRSPAVD RPSRKRRKVD YGGADGEADS 120
  121 DKPYSNDDRL AITTRDNNRY PVFEPKDKLL VFRKSFSVPL KNKDSTAYNP NRAPPTLGLR 180
  181 QGAVFVAKPL HDPSGEFSIV LYDPTIDDKP KDMPKAIEPT KAETLEEKLD APLVHKSLAE 240
  241 ILGIKKKTDD EHPRVPVVID PRLAKILRPH QVEGVKFMYQ CVTGLIDEKA NGCIMADEMG 300
  301 LGKTLQCISL MWTLLKQSPD AGKSTIQKAI VVCPASLVKN WANELTKWLG ANAINPFAID 360
  361 GKASKEELTR QLRQWANATG RSVTRPVIIV SYETLRLNVE ELKNTKIGLL FCDEGHRLKN 420
  421 SDSNTFNALN SLNVSRRVIL TGTPIQNDLT EYFSLTSFAN PDLLGTRLEF RKRYEIPILR 480
  481 GRDADASEAD RKKGDECTAA LLGVVNKFLI RRTNDILSKY LPVKYEHVVF CNLAPFQFDL 540
  541 YNYFIKSPEI QALLRGKGSQ PLKAINILKK LCNHPDLLNM SDDLPGSEKC YPDDYVPKEA 600
  601 RGRDREVKSW YSGKMAVLDR MLARIRQDTN DKIVLISNYT STLDLFEKLC RSRQYGSLRL 660
  661 DGTMNVNKRQ KLVDRFNDPE GDEFIFLLSS KAGGCGINLI GANRLVLFDP DWNPAADQQA 720
  721 LARVWRDGQK KDCFVYRFIA TGTIEEKIFQ RQSHKQSLSS CVVDSAEDVE RHFSLDSLRE 780
  781 LFQYRSDTKS DTHETFKCKR CKPDGKQYIK APAMLYGDTS TWNHFVNEGL KPIQDLLLRQ 840
  841 ECGEAEVSAV FQYISH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle