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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46127145, gi|...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPVPTQYLL LISAWTTTSI DLIFAAHVYA RAIGFCRIFP QPIPSPMRAQ LRRTICSHSP  60
   61 SVRSSQSLTR HIQLRSSVLS SSLLRLPLNK PRATPTLTRS LATARYLTSP RIRPTTLKTL 120
  121 DCQTVVAKRS HITASGAAGF SSSGNPPLQA NLLHSVVIAA AVIATAVAVS AWTVGSSNNP 180
  181 PPPGDIEEEI AIMSFQVPPG RPGNLTPEQE EKLRKLWVAV FQLTGVADEE SSGAEILSPK 240
  241 EEISSADADQ KKKRGFGMFK KGKSGTSTPT ESADEDKYNE TKQFHETLAK ETPETIRHTI 300
  301 WSMVKHDHPD ALVLRFLRAR KWDVEKALVM LVATMNWRHN DMKVDDDIMK NGDAFAVEDE 360
  361 KTDSATKQVS ADMMKQLRMG KSFLHGTDKQ GRPICVVRVR LHKAGQECEE SLEKYTVYII 420
  421 ETARMTLEPP VDTACIVFDM TGFSMANMDY TPVKFMIKCF EANYPESLGA VLVHKAPWLF 480
  481 QGIWKVIRGW LDPVVAAKVH FTNNRSELED FIAPNHLIKE LEGDENWAYK YVEPSPGEND 540
  541 KMKDTQTRDR LLVEREELVK KFEQATREWI RHPEGEQGKQ IKSEREKIAK LLKEDYWHLD 600
  601 PYIRARTLYD RQGAIQSGGK TDWYSLKPPT AAASTSADDL D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle