YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46125605, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLIKSFVLG ALAATVAAKS AVIELLPSNF DDIVLKSGKP TLVEFFAPWC GHCKKLAPVW  60
   61 EDLANTYESA KGKVQIAKVD ADAHRELGKR FGIQGFPTLK FFDGKSAKPE EYKSGRDLES 120
  121 LTTFIAEKTG VKSKKKLEMP SEVTYLNDAT FSKTVGSDKH ILVAFTAPWC GHCKTLAPTW 180
  181 EDLAATFAND KNVVIAKVDA EAPNSKATAE QQGVKSYPTI KWFPAGSKEA VAYESGRTEQ 240
  241 AFVDWINEKA GTHRVVGGGL DNVAGTVESL DTLVAKITGG ATIAEIAAEV KKEVEGLTDA 300
  301 AQKTYAEYYV RVFDKLSSNN DWVSKELGRL DGILAKGGLA PSKRDQIQQK TNVLRKFVLK 360
  361 KADEKVEQVK EKVEEVKDEL

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	380	0.99