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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46125601, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.50
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQAQHPIAT VLFILFIIWV VFPDSDYSSQ SLSLSDLAKE RLDHFQDALD VLNASRWGDF  60
   61 TPAPEKGSNV NSSFLNITGF RAQDNLTWVD LNKFRERSLS FSRHAVPPVG GRSLWDAGEG 120
  121 EPMWMNVSGT VHGEWVKRKG AVPRSYDSYN LSKTAPGLDW IGDHTSWARN ITGRTGRITL 180
  181 RLEANKTVSE YEQLPAQSGA PVAGGLIRSV RGTTTIEDTY GSGHDWEMRL WGVHWPRQGV 240
  241 VLMATTSEKF GGIFGLPHLT PSEDFFQSSQ KLLNESIART ISKKKDKIYA DQTVPWTSDL 300
  301 ENPLYTNNPS PHCEYIMYVQ VYPPSRSHFN LDSEELSKDV LQSVISSIES ELKSPVGAPI 360
  361 PKIPKLQMSV VIYSPDCGFF LESKGPPDFG PGEAQHLTGM KLEVQVYQVK AWILVYAVIM 420
  421 FAQVYLLKNQ MRESCTPSTM GRVSFWTIAT MLMVDGMAFT AAATWVSSAG STFLPTLALL 480
  481 LAAFLSMTIG GSFLSKVHEV QIPEARPRRE RDQNAGSTGN NSNAAVSPAT GLNTADSAPL 540
  541 LPNPDAARHT LTSRPSAPAQ PPPPPQPVIV PSDQDIDAEI AASAAAVPGA TTAQRAEELP 600
  601 LSFQSIIGRL ILASLCIIFL AISSTTWYPN LRSIFLNLCV FAYLSLWIPQ IRRNIRRNCR 660
  661 RALAWPFVVG QSILRLLPVA YFWIKEDNFL YARTERHTFL VLCAWVWIQL VILAAQDIIS 720
  721 PRFGVPTGWA PDAWDYHPLL REDGLEAGGL PIGLVADDTP GIERARSSSD DSSKKQSSMR 780
  781 SIDCAICREI LEVPVLTAED DDTGVAGVFA RRLYMVTPCR HIFHSGCLEG WMRFRLQCPI 840
  841 CREELPPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle