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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46124477, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSTIVTAS ILAMRLFTLP ASAAPQAAIP VPATPEYSAP VTPEYSVPAA PEYSAPVAPA  60
   61 AAGSWWMSSI KRQGAVAYGN SANYKIFRNV KDYGAKGDGS SDDTAAINAA FSDGSRCGKG 120
  121 CDSTTVTPAL VYFPPGTYVV SKPILPYYYT HMIGDVNDLP VLKPAANFEG MAVIDVDPYN 180
  181 NDGSNWHTNQ NNFFRQVRNF KIDLTGMPKS SGTGIHWQVA QATSLQNIVF QMIEDPSEDN 240
  241 KQQGIFIDNG SGGFMTDLTF IGGRYGGFFG SQQFTSRNMT FRNCQTAVYM NWNWLWTLNG 300
  301 LDISGSKVAI DMTAGGGVQN VGSILLTDSK IANTQVGILS NYDPAQPGTN GTLIIDNVDM 360
  361 SSVPVAVQNG GTSATILAGN TKIASWVQGR AYTGGNGEAV QATQTPIEKP KAILDSNGNV 420
  421 VTKSKPQYNS VPASSFVSVK SKGAKGDGKT DDTAAIQAVF DGVQEGQIVY FDHGAYVMTD 480
  481 TVKVPKNIKI VGEIWPLIMA GGDKNFKDQA NPKPVWQVGE SGDVGNVEIQ DLMFETLGPQ 540
  541 PGAILMEFNV AGETPGSAGL FDVHFRLGGS AGTQLQSDTC KKTPNVKTEP KPECMGAFML 600
  601 FHMTKDSSCY LENTWFWVAD HELDRSDHSQ INLYNGRGVL IESTKGAWLW GTASEHSVLY 660
  661 NYHLQDASNV YMSLIQTETA YMQGNPDATV PFTVNAKYHD PDFKATCTGD SNRCARTWGV 720
  721 RAVGSNDIFI FGGGLYSFFD NYDQVCVGEN NCQDNMISIE SSKVHLYGIS TKASVSMVNV 780
  781 EGKPVALDKD NRNNFCAAIA RFSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle