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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42553241, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRVIVVGG GLSGLSAAHT IYLAGGNVVV LDKQGFFGGN STKATSGING ALTRTQVDTG  60
   61 IPDSVKQFYD DTLKSARDKA RPDLIKVLTY KSAAAVEWLQ DEFNLDLTLV SRLGGHSQPR 120
  121 THRGHDAKFP GMAITYALMQ RLEELAESEP GRVEIVKKAR VTELNKEGNK VTGVKYEHNG 180
  181 EIVSIDGPVV LATGGYAADF SDSSLLKKHR PDTYGLATTN GTHATGDGQK MVMAIGGNGI 240
  241 DMDKVQVHPT GLVDPKDPGS KWKFLAAEAL RGEGGLLLNA DGDRFCDELG HRDYVSGMMW 300
  301 EEKKKNKFPI RLILNSKASK VLDFHTRHYS GRGLMKKMTG KELAKEIGCT PEHLQKTFST 360
  361 YNDIADGKQK DPWGKKFFHN LPVNVDDDFH VAVMEPVLHF TMGGIEINDK AQVLNQEKQP 420
  421 FEGLYACGEL AGGVHGANRL GGSSLLGCVV YGRVAGDTAS NYLFQNALKG GAGSAAERVG 480
  481 QISLHLDPSI PNQVTVSWGA PGAASGSGAP SKVDEHASVA AGPNPVKEDG AKAAKPNDPK 540
  541 AFKVPEKEYT MEEIAEHNTK DNVWVVVKGV VLDLSDWLEE HPGGVQAILN FMGRDATEEF 600
  601 EMLHDDEVIP KYAPQQVIGR VKGQEVTLEP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle