YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46122775, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALISAKTII TSVSLFHLTL GYFFLTSPSS INEQALVFMM GDSMGMPLAR GFEVQSSPLA  60
   61 FLAVILIFIG FSDLVSLSMP DEICLVYHWG SQAPIRSFIS LVFVAYVFLF GPSSPIFGKS 120
  121 SVGPAYRPAG WGGDMLKNRL FFTFIFIETM TWFWIWVTLR EERDAIMSKK SRRRNSHSL

Type	Start	End	Confidence
Cytoplasmic	1	8	0.91
Transmembrane Helix	9	31	0.81
Non-Cytoplasmic	32	55	0.84
Transmembrane Helix	56	77	0.89
Cytoplasmic	78	96	0.82
Transmembrane Helix	97	117	0.87
Non-Cytoplasmic	118	139	0.92
Transmembrane Helix	140	159	0.97
Cytoplasmic	160	179	0.97