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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46123047, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNDEASRLL HARISQLEQD AAGEKDQELE IEREVKRANR DLLQQRSSEL LADMRRLERE  60
   61 NQKNKRRGDN LQKERDASRT ELSKTVGLKE KLEKLCRELQ RDNNKMKNEN KELQTTQKRN 120
  121 NTHWDEKYAT LLSKLEGYQE EKDTPKKQVV DMEVDELFRV RFKSFIEQYE LRELHFHSLM 180
  181 RTKELEVQYH MARYEREKKN AEAESTKARH LQGQVQAFTK TETELRNQLN VYVDKFKQVE 240
  241 DTLNNSNDLF LSFRKEMEDM SKKGKRLEKE NEALKRQKEA TAANIIRMAE ERQDWKKKTE 300
  301 SAEKKTEKLR SIIQQMQQQG RKVPPGMVNT VESGYSDSHG GHEGDESDYS DEEGEEEEEL 360
  361 SEFDDDTEEE TQGNDQATPV AYAEDLAFMN EYIRGIRFIN NTATMDFLQR LARFLDRPLF 420
  421 PWKKLIMGFS VGQYLFESFL TLRQYRVLQK TSPPAVLSKE VSQEVFDKSQ AYGRAKAKFE 480
  481 IINGLYSQVQ NIAFMHFDVL PKLWSWTGDL LLKWAPARFT GEISHTIVFV LTFTVISQLL 540
  541 RLPSSIYQTF VLEEKFGFNK QTPKLFITDM VKTQALTLVL APPFLAGFLK IIQKTGNQFF 600
  601 YYLWLFFIAL QVFMITIYPV AILPLFNKLS PLEDGELKTK VESLAASLKF PLHELYVIDG 660
  661 SKRSAHSNAY FFGLPWKKHI VIYDTLIEKS EPEEVVAVLA HELGHWKLGH TTSLFGISQA 720
  721 HSFYIFTLFS VFINNHSLYS SFGFLKEHPI IIGFILFSDA LAPMDLIINL LMHIVSRKFE 780
  781 FQADAFAKSL GYPEQLARSL LKLQIQNLST MDADWMYASY HFSHPHLSER LNALGWKGSE 840
  841 GVTEGVSDKS LDNEKEGVVK ASGRDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle