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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46122551, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNFISWLED NLPDPKSTKG NAGEARGPQP KSVSSMVSTL VPVLVASAAY ILIFLILRKS  60
   61 NRRFYAPRTY LGSLREHERS PALPGGWFGW IGTFWKIPDA YALQHQSLDA YLFIRFLRIC 120
  121 CTICFVSLCI TWPVLFPVNA TGGNGKTELE LLSYSNINIQ SSKERNRLYA HCFIAWIVYG 180
  181 FVMYTIMREC LFYVSVRQAF LLTPQYAKRI SSRTVLFTSV PKDYLDEARI RTLFNDSVKN 240
  241 VWIPGETKEV DEIIEERDEV AMKLEKGEVK LLKLCNKERI KSMKKSGAEA EKQNSGPTDP 300
  301 ETGDLAARWI PQKKRPTHRT GPLGLIGKKV DTIEWGREEL KTLIPKADEA QANWLAGNYE 360
  361 KHSAVFVEFY TQSDAQAAFQ TTTHHHALHM APRHIGVKPD EVVWNSLKFP WWQIVIRRYI 420
  421 IAAIIAILII FWAIPVAIVG IIAQVNTIKT LPGLTWIESI PSVILGVISG LLPSVALSIL 480
  481 MAMVPIFMRV CAKQAGCVSI SQAELYTQNT YFVFLVLQVF LVQTLANSFV SSIVTIVQDP 540
  541 SQVFTMLSSS IPTASNFYIS YFIVQGLGIA TSVLTQVVGC VIFNLLYKFL ASTPRAMYNK 600
  601 WTTLSALTWG SLMPVYTNIA VISIVYAVIA PLMLFWSTLG MALFYLAYRY NILFVTETKI 660
  661 DTRGLIYPRA LKQLFVGVYL AEVCLIGMFI VSKAAGPAAL MVIFLIFSIL FHMTMAKALN 720
  721 PLLYNLPRSL EVEEERIQQS AQGSELEDGQ VLNNNGVTNA TTNGVENGDA KSTRVGKFVP 780
  781 GGVGGVQKKG NFFSKWLKPW IYADYATMRQ LVPHESTMGL DYTEQVERDA YFPPSITSET 840
  841 PILWIPADPA GISKQEVLHT SKVIPISDEG CTLNDKNNIE WDTEGARPPI WTEKIYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle