YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42552360, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRQHLTLT FILVLGVFFT LSYFFSGPTR SVLLPKLQND VELPLKDASR SEFVADLNAM  60
   61 PAGLLQGESI APKLENATLK AELGHATWKF LHTMMSRFPD KPTKDDRMAL ETFMHLFARL 120
  121 YPCGQCAEHF RKLLAQYPPQ TSSRNAAAGW LCFAHNIVNE RVHKPLFDCE NIGDFYDCGC 180
  181 GDKDKKGGVE GVAGEGPDQE LHKH

Type	Start	End	Confidence
Cytoplasmic	1	6	0.66
Transmembrane Helix	7	27	0.65
Non-Cytoplasmic	28	204	0.97