YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42552211, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASRSFATC LAKLPATACR TTQPMRFSQN IMSQASRSQF AVIPRAVRFS PVSQRAFTTS  60
   61 TQRRHGHIDP PKPGEELYVT FIEKDGTENK FAVSEGDNLL DIAQANDLEM EGACGGSCAC 120
  121 STCHVIVADD EYFDKMPEPE DDENDMLDLA FGLTETSRLG CQVKMTKEMD GLVVKLPSMT 180
  181 RNLQASDFS

Type	Start	End	Confidence
Signal Peptide	1	18	0.93
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	189	0.99