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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42551894, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRPAKRQRS TEFEAHAPES LQRSISPPRK RARKPVAIPS PWQLTWIQDL PESENKDAVS  60
   61 LRDLLGDPLI SECWEFNFLH DIPFLMNAFD PDTRHLVNVH LVHGFWKHED KNRIALENAA 120
  121 AKFENVNVHI APMPEMFGTH HSKMMILFRH GDTAQVIIHT ANMIPKDWTN MTNGVWKSPL 180
  181 LPRMSKTQTP ASSPEEFLVG SGERFKIDLL NYLKFYDKRK IICKPLSDKL KQYDFSTIKA 240
  241 ALIASVPGRH DAHDMSETSW GWAALKRCLR HVPCHQHGDS DIVVQVSSIA TLGPKDDWLQ 300
  301 KTLFDHLGRC KDTGLRRPRF KVVFPTADEI RRSLDGYASG LSIHTKIQSP QQAKQLEYLR 360
  361 PMFHHWANDS PGGTKLPDGP VLESGRKRAA PHIKTYVRSN KSSIDWGLLT SANISKQAWG 420
  421 EAARPTGEMR IASWEVGVLI WPELLEPGSV MKPPLVLFLV PSLLLHLSLI SCNQRIALRR 480
  481 GAGVSPYGTP RGSGAHPALS SSWRVGSPLA EAALAADIAA CSDEEYDDSA IDDDVSVSDL 540
  541 PGDPIMYRRP SGVAFGGSRP IMNPQIYDEP GLTALERKQS RNAERSLLRD NHVLPPKHGH 600
  601 RQQDGFFTRI YQRLFSTKIP QDEEQAPAIS VQPPSETDPL LGSRVDAVSP EHLNETWEHA 660
  661 VAEHRIKTTW QREAKTIASY SAPLIVTFLL QYSINVTSIF AVGRIGKLEL GAVSLANMTA 720
  721 AITCLAPFQG LATSLDTLCA QAYGSGHKHL VGLQFQRMTC FLFVLAVPVA VFYWFSEGVI 780
  781 RALVPEPESA RLAGMYLRVM IFSIPGFILF EGGKRFTQAQ GLFRATTYVL LIVAPFNVFL 840
  841 SWLLVWKLEW GFIGAPAAVA ISTNLLPIFL FLYVRFINGR QCWGGFSRRA LSNWWIMIRL 900
  901 ALPGMIMVEA EWLAFEILTL MASRFGPEYL AAQSVVTTIT TLSYEIPFPM SIAASTRIAN 960
  961 LIGAGLVEPA KKTGVVAFAA ACLIGMFNLT LYTTLRYKLP LLFTKDDDVI ELVAEVMPIV1020
 1021 SVMQVFDGLA AGAHGLLRGI GKQSIGGPAN ILSYYALSLP VSLALAFGLG WKLEGLWIGV1080
 1081 TCGTISEINE KFEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle