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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46121561, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPKLLSVEA ALFLALPELA RAATRKFDFE IGWVRANPDN AFERPVIGIN GQWPIPTIEV  60
   61 DIGDRVIINA HNNLGNQSTS LHFHGLYMNG STHMDGPAGV SQCPIIPGTS FTYNFTVDQP 120
  121 GTYWYHSHTA AQYPDGLRGP FIVHDKDFPY AKKYDEEVVL TLSDWYHDEM RSLIPQFMAK 180
  181 SNPSGAEPVP KNALMNETTN FTMSVQPEKT YLFRVINVGA FAGQYLWFEG HKMQIVEVDG 240
  241 IYTEEAEAEM IYISAAQRVS FLLTTKKDTS KNFPIVASMD TTLFDVLPPD LKYNSTGWLV 300
  301 YDKKAEKPVP ATVDSLNPFD DMTLVPYDKM EILGKPDKEV VLDVKMDNLK DGKNYAFFND 360
  361 ITYTEAKVPT LYTALSAGKD AEDPAVYGTY THSMVLKKNE IVQLVVNNLD SGRHPFHLHG 420
  421 HAFQSVYRSE EEAGIWADAN VTEKNLPKTP MRRDTLVIYP NGNIVMRFKA DNPGVWLFHC 480
  481 HIEWHVISGL IATFVEDPLA LQETIEIPKN HLDACAAANM PTKGNAAANT EDFLDLTGEN 540
  541 KPANTLPPGF TPRGIVALVF SCICGILGVA VVAWYGFSAP VGSTSAGALS AGLVENDSGD 600
  601 VHSAQKGPQE TVVSPTGDAR SH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle