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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46121529, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTPVSPTSS KLPGFDPHEK PDRYKFKPKR QGIIGRMKES WMTQSQRTRW IKTAAIVFAI  60
   61 VTLFYFISPK GVEVYHEVTK PAHAINNGQS PSDSSYGTDR CAKSFSKDKP IVQYVLMIDA 120
  121 GSTGSRIHVY KFNNCGPTPE LEHEEFKMTE KEVGGLSNYK GNPVAAAKSL DPLLKVAMDT 180
  181 VPNALKGCTP VAVKATAGLR MIGKEAADAI LDEVRRHLEQ DYPFPVVDKE NEGVVIMDGS 240
  241 LEGVYAWITT NYLLGKIGGP DKSETAATFD LGGGSTQIVF EPTFKGAADG GMPEKLAEGD 300
  301 HKYDLDFGGR HFELYQHSHL GYGLMAARKA IHGALIKDLT ASKGADKSWL KEPIVNPCIA 360
  361 PGMTKAVNVT LDGSEDLTLV TFTGPSQPAP AQCRNLAEKI LKKDEKCDLA PCSFNGIHQP 420
  421 LLSKTFSKED VYIFSYFFDR TKPLGMPDSF TLREMHDLTQ TVCMGKTAWD VFTTVPEAMT 480
  481 ELNDRPEWCL DLNFMMALLH TGYDMPIDRE VKIAKKIKGN ELGWCLGASL PLLAGGSGWS 540
  541 CKVNQIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle