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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46121375, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAADVPDT SPGLRQRQSG VGSTAQQDTQ AQLSHDLEPS ETINSSEKSS KTYGRTPDGT  60
   61 VFIVPTTHDM VSQLLDPRQP KNLSDAIVLA ILGLHILAAY FLPSGSKRTV FAVVFLFWRA 120
  121 CYNIGIGVLL QIQSNHRRLV TWAKRWKLFE HPSTGKNPRP WLYKLLKTEL ETKITEDYEF 180
  181 EKAPLEYNTW LVFRRVVDLI LMCDFVSYCL FAMVCGHTPE GENPLIGFSR WAVGISLIGF 240
  241 NLWVKLDAHR VVKDFAWYWG DFFYLIDQDL TFDGVFEMAP HPMYSIGYAG YYGISMMAAS 300
  301 YEVLFISILA HLAQFAFLVI VENPHIEKTY NPPPPRKRTV SGSQIDTIPA DTRSIEGAFD 360
  361 QQTLKPSQKD EPGQVHNLVG LSNLDLFRVP DFAVIVMPFY VAILTLATPS TAAWQAAFVF 420
  421 HALVWRVWYH LGLGLILNQQ SKNKMWTRHF LKFGESAGEA WRQWKGLHHI SMIMCNTAFV 480
  481 AACWKMYSPP EDWAYGLVML KHVLGASLVA LQLWTAFSVY DSLGEFGWFC GDFFFDHQAK 540
  541 LTYKSIYRFL NNPDRFFGTA GVWGAALITW SRSIFLMALV TQILTVFYIS YIERPHMQKI 600
  601 YGRGLRQEAG LTKFIKKSLP PHVKGWQESV DKVLDDTSQF VEDFLDTARP KFASGVKTIV 660
  661 RDTSALFNMA PARLTITRIT PDLEGYDPKL YSLSVNGMQT THAPIVEKYT GKESLTGRFP 720
  721 KPVRTMAFEY GAPLRVKWRA PANHSKKDWI GLYMVTDNRS RETTEVSSLG RWAPTNAGSY 780
  781 DSLTADVSIL VDEHPVSATN ATDADLVEGE VIFEGDKLWW TQGVFEFRYH HNGHHHAMAI 840
  841 SEPFEIRISK FDEEDVDLGA KGLYEQAVEA ALLPVVQNCL DRDPDIAPNQ PEEPFGGHVE 900
  901 RDTKYAKRIV YAIREMFGIE FAPPVVAADG SVRKLAWRVC NAKEVLLLGT LQHVSIERNN 960
  961 YTCASRLSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle