YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42551515, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVNLKTFVF DESESRQAAC SSPPAKHKAQ AVGGGGLQHP TFLAVTQVIH PPPSYPRFCR  60
   61 LTWIKTTTPK ISASYPPLLL ERTPRLESTM ADEHNHLAES GVTMHSDIEL YSAGDDLSSP 120
  121 PSSNSPVVLY KPPTVWSLMR GTAINLLLPF INGMMLGFGE LFAHEAAFRL GWGGTKVFPL 180
  181 SRRRAHPIGP GIELRENYCT PRPSLDDIAS LE

Type	Start	End	Confidence
Cytoplasmic	1	142	0.63
Transmembrane Helix	143	163	0.64
Non-Cytoplasmic	164	212	0.86