YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46123809, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRSLTAS LRWVAPARGV AAVRYSSSST SAIAYKALRR RSAPLPVRDN PPAWSAQSAV  60
   61 SNILYETPVP STVPPKRHIL NCLVQNEPGV LSRVSGILAA RGFNIDSLVV CNTEVEDLSR 120
  121 MTIVLTGQDG VVEQARRQLE DLVPVWAVLD YTAAALVQRE LLLAKINILG PEYFEELLNH 180
  181 HREIAAGEYD VDNAHEAIER SISDTAKDFH PSKLAVSQAL RHKHEHLKSI TYFAHQFGGK 240
  241 VLDISNSSCI VEVSAKQSRI DSFLKLVAPF GILESARTGL MALPRSPLNE ASQEAVTMEA 300
  301 DDVVDASQLP PG

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	312	0.99