YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42551083, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKSTLRRRN GQDATNNDSA DADDTPREES PTAEPTTHVR VVQHAVPRTR KRRNTFVFFL  60
   61 GSLFGIIAAG FFASSNDLID LPEFTDLSMD NLMDVLPAGL IKDMRDLVQG ERDIAESYEP 120
  121 FSVGEKARSE GLGVHHPMIM IPGVISTGLE SWGTANISKP YFRKRLWGSW TMMRALVMDK 180
  181 EVWKKHVMLD KRTGLDPPDV KLRAAQGFDA TDFFITGYWI WSKIFENLAS IGYDPTNSFT 240
  241 AAYDWRLSYP NLEVRDRYFT RLKSHIEIAV ATEDKKVVLA SHSMGSQVLY YFLHWVQSER 300
  301 GGRGGPDWVE RHIDAWINIS GCMLGAVKDL TAVLSGEMRD TAQLNPFAIY GLEKFLSKEE 360
  361 RAEIFRGMPG ISSMLPIGGN SVWGNLTWAP DDLPGQNRSY GSLLNFRVGS NWTTPDRNFT 420
  421 VEEGVSYLLN TTEDWYQDQI KGSYSRGIAH SIDEVEANEN DPKKWINPLE TRLPLAPSLK 480
  481 IYCFYGVGKP TERGYFYKPP DQPSLTNLNI TIDTGYTEGD VDHGVVMGEG DGTVNLLSTG 540
  541 YMCNHGWNMK RYNPAGVKVT VVEMPHEPDR FNPRGGPRTA DHVDILGRYN LNELLLRVAS 600
  601 GKGDTITNYV VSNIKEYASR VKIYDDEETS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle