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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42551067, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVIERSDQI RWMSISRQEH KLTRYVNVAS SLLSVIVLLL NNPKLLALSL TPLSTGDLRL  60
   61 SALRQLPVRM PETVGENGNA APGRLLLLSN RLPITIKRSE DGSYSFSMSS GGLVTGLSGL 120
  121 SKTTSFQWYG WPGLEVPDNE VEGMKQRLKE EYGAHPVFID DELADRHYNG FSNSILWPLF 180
  181 HYHPGEITFD ESAWAAYQEV NRLFAKTVIK DVQDGDLIWV HDYHLMLLPQ MLREEIGESK 240
  241 KNVKIGFFLH TPFPSSEIYR ILPVREALLT GLLDCDLIGF HTYDYARHFL SSCSRILECP 300
  301 TTPNGVDWNG RFVTVGAFPI GIDPDNFVEG LKKPKVQERI AALSRKFEGV KLVVGVDRLD 360
  361 YIKGVPQKLH ALEVFLTEHP EWIGKIVLVQ VAVPSRQDVE EYQNLRAVVN ELVGRINGKF 420
  421 GTIEFMPIHF LHQSVNFDEL TALYAVSDVC LVSSTRDGMN LVSYEYIATQ QKNHGVMILS 480
  481 EFTGAAQSLN GSLIVNPWNT EELANALHDA VTMSPEQREA NYKKLERYVF KYTSAWWGAS 540
  541 FVAEMTRLSA EGSQPKTLRN VSGAVIGLEQ KAQQIVTGLE KKADELLSGN EKNETETSEE 600
  601 PSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle