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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46122213, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLASKAAF PAGMGSSSHT PVASQPAMPL PRRTPMMPSS GAYGSPTESE FTEHDPAESV  60
   61 KNWDEDQVCE YLRTVKCGEY EKIFRKNHIN GENLLEMDKD VLKEMGVEKV GDRVRLFLSI 120
  121 KKLRTRAYAN EKKRNRDSFG GLDIQITAPN DSPRLHSSRG VPASSSKRYS RQLDLYGALD 180
  181 NGKTSSRPNS PLPGTDVRNL RARGKTYASI PVNAQGQRIV TTNPDLPANR LVTTHTRNNS 240
  241 SMDGSLMAAL PQGQEVIRVI STGGVTKVVK ISGCNTCEEV MRVTLRKFAL REDHERNYCF 300
  301 WVLAGIDPDP GQCRRLGDTE LWRIIKDQRR PERNRLILRR VPAGEPGEAE LHRAAAIAME 360
  361 EEQQKHARAL ETVDKRRSLR PFGGLRPPSE LIASDLTSYF PDHTREDIDR TARLSMRRST 420
  421 RMSKVNSRLS VASNLSFASS IQDAPPIPTI ADSWLNANTQ LAKVRTRDSH IRVPQAAYNR 480
  481 DSVTSSVLDT LQEESSLEPD RKSYVSFTES GSDSAPVSVT DPEGNTTATS YYDGDTSTGS 540
  541 GSFQEIRQAL TNDGDDVDEE LHSFLAGESW GDDKWMKGAL IGQGSFGCVY LALHAVTGEL 600
  601 LAVKQVETPA PGANSQGDNR KKGMIDALKR EISLLRDLRH PNIVQYLGCS STADYLNIFL 660
  661 EYVPGGSVQT MLNSYGALPE PLVRSFVRQI LTGLSYLHNQ DIIHRDIKGA NILVDNKGTI 720
  721 KISDFGISKK LEATNILNGA NNSKHRPSLQ GSVFWMAPEV VKQTSYTRKA DIWSLGCLVV 780
  781 EMMTGSHPFP DCSQLQAIFK IGGGKAAPTI PEHASEAAKE FLAQTFEIDH NLRPSADQLI 840
  841 LSPFLIPIT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle