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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46122427, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKPKAKPK AQQQTPQTEH QKIAEQWAKA ERARAAQQTA NARFGLPPAD ENVEVLEQRR  60
   61 EALDQRRRKT NEKSWRWAAG FWVVVLAIHA LGIWLFTGGF LLTRLVLEDK SNCTIPPIEN 120
  121 TKGLLNVDRG CWHPKSFDRA VVVLIDALRY DFTVPEDPAQ AQHFHNAFPY LYETAVKSPQ 180
  181 NAFLRPFIAD PPTATMQRLK GLTTGTLPTF VDVGSSFGGS AIDEDNLLMQ LKDAGKKIAH 240
  241 IGDDTWWSLF PGYFEPNISK AYDSFNVWDL HTVDNGVIDN IFPLLKPERK GDWDLLIGHC 300
  301 LGVDHAGHRY GPDHPAMGAK LRQMDDFIRK MVESIDDKTL LVVMGDHGMD SKGDHGGESD 360
  361 DEVEAALWMY SKKPFFGRTS RDFAVPPANA KIRPVNQIDL VPTLALLLGI PIPFNNLGGP 420
  421 IEEAFAGVKG NDWRNLAAVS RVASAGIERY QAAYHKARGL VQAEGIESPV ALWQAALAIA 480
  481 KNDRDAHVAF SKFQECTLSV CKDLWARFDV PRMVMGIVVF GFGLVLLMMY SSRDEEDEYV 540
  541 IMNDAELDYA EKKLELLSFK ENDPEIEDNF HKNVLKGLWD PKILFTVSVL TAVGMYRQHP 600
  601 IEGLVALVAV LFMAGLSSSL HEAGKTILNV FPSSFWVWMA VVFTVSQSIG FASNSYTIWE 660
  661 DSILLFFITT FGIASAVSAF RIESRRERYL GIYHSVAFVV LGRIASYSKL CREEQMPYCT 720
  721 STYYASSTSS TSATWQLLIP FVVCLVLPAI IKSFLVTSRS YEGIAPTWIG LAIRGGLFLS 780
  781 ALYWVIDAAD NGGWLEGRLG DGALKTVGVY LAQTVLALAF VAGSTVFVWA PPCVSILQSS 840
  841 GAAGRPIVTI IGYGNAVGAR YLLLPLNILL GCFLLTKPMG GGALAIMFWQ ILTLAELLDL 900
  901 NELKTSPIGP VMLAILGNFY YFKTGHQAVL SSIQWDSAFI PLFTIRYPWT PIVVVLNSFA 960
  961 GQIIAAASVP LLALWKVGPK QKGVMETATR SIGVFVIFYA VEALATMSWA GWLRRHLMLY1020
 1021 RVFSPRFMLS STVLLVLDLV IILVTMTGLR SNMMSLGEVF GWAD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle