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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46116238, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKERDTQNMN GTQIELDSLP TTDSIKHEPP ILYGAGNWIN GFRRAEPRPG YLPTDAPERF  60
   61 YDLRAANAKT ANTALARELK GRHLQMIAFG GSIGTGLFVA SGGSLYRGGP ASLLLSYVLI 120
  121 GGMQYCTMQS LGELCVAFPI AGSFSAFSTR FLDPSWGFAM GWNYCLQWLF VLPLEIIAGA 180
  181 FTIGYWDETI DRSVFVSVFL LTIVAINLFG VKTYGEAEFI FSIIKITAIV GFILLAIVIN 240
  241 IAGEPEGHYI GGMYWRNPGA FKNGFKGFCS VLVTSAFSFT GTELIGLAAA ETANPRKSLP 300
  301 TAIKQVFWRI MIFYLVALLL VGLLVPSDDS RLVGGDNVAD ATASPFVIAI EKAGTSLLPG 360
  361 IMNAIILIAV ISVGNSAVFG SSRTLAALAE QSHAPHIFAY VDRQGRPLMA ILFASCIGLL 420
  421 AFLADVKYHD AIFNWLLSIS ALSTLFTWGS ICLCYIRFRA AWSHNAHTIE QLPFKSNVGV 480
  481 AGAWVALIGY ILVLLSQIWI AASPVYAPDI VDGASGVAQN FFLKVLAIPI ILLFYICHKA 540
  541 FVVQYMGDVH MKAMEASYAT ILWGVALAVV GFLSHRIIAI ALRPHSSRFN GLPRPKGQQP 600
  601 FAGHALRILR GGGPNDVYLQ WTRQWPDAPF IRCLSWLNEE ILLVNSLEAC REVLQTNAYF 660
  661 FAKPGFFHTL VGEFLGLGLL FSVGEQHKRL RRIIAGPLSR PSIRKLFPTF VTYSQKLNRE 720
  721 IGEALERSKS GIVEIEDLII RVTLDIIGVS LLGRELRDFR SESSPLSFEQ CYNAILAQPL 780
  781 AGQIISFINP FIPLRWLPVS ANLNFIRAKS ALKTMMEGLI EQRTAEVGAA KLMNEDDKLS 840
  841 DDLLTRMIEA SAEESQKLSK EELIDITMQV IAAGHETTAS ALVWTAYSLA KDPASQQSLR 900
  901 AEIHSLGTEM SAKGIDELPF LDNVIREAMR VHSPTLIIPW EAQKDMTIAG THIPKGTTVQ 960
  961 IVPAMIQLNP EIWGSDADVF RPGRWEDMGG NASSPYAMET FSNGPRMCPG KALALLNMKV1020
 1021 LLVGLIRDFE MEIVDDGKEV ELRNPSLTLK AKSLIQFKMR KVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle