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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46117250, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSNWINPI LLASSLSAQC MGAVVSNDQK ALINDTAHGK KKNIVFILTD DQDSVLDSVS  60
   61 YMPKLKENII DKGASFINHF TTTAICCPAR VSLWTGKQPH STNVTDVSPP YGGYPKFVSQ 120
  121 GLNENYLPVW LREAGYKTYY TGKLFNSHTV NNYNSPYPAG WTGTNFLLDP GTYDYLNPIY 180
  181 QHNQEAPVYH KGEHTSDLIA KYSHDLLKEA IDSNNPFFVA IAPIAPHSDI SVDRVAGSGM 240
  241 TIPIPAERHS HLFEGVKVPR TENFNPDSPS GVSWIKELKQ FNESSVSHLD NYYRARLQAL 300
  301 QGVDEIVEQV TQQLEDAGLL DDTYIIYSSD NGYHLGQHRL PPGKECGFEE DIRVPLFIRG 360
  361 PGISSGAVEK TVTTHIDLAP TILKLAGVEL RHDFDGTPIP VLDYEEGKRH EHVAVEFWGV 420
  421 AIAEGGFGGF DGKGLLQVHN NTYKGVRIVH EDYDLYYSAW CNNAHELYDV KTDPGQLNNL 480
  481 FPLDSKATAD KEFLGTTVQQ VINRLDALML VLKSCKGNTC IEPWKTIHPD GKVANLKGAL 540
  541 TGKFDSFYEE QVKVRFDRCE EGYLVDAEGP QVGCAALCFK HTSTNQDAAD LEPREHLTTA 600
  601 LPIYDNLTLR SSIESATMGS DAITEPRQAT REEMRDAKLP LAYRDSCAHL LIPLNKCRRD 660
  661 TWYAPWKCSD ERHSYEKCQY VEFKKRVAKM DELRESKGGA RSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle