YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42544741, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGSPTCVLM ILKTTLFGTC SRFSVLLAER LTQTMLESTV FRGEANFVWK CKNCKRESSA  60
   61 SVKSGPAAYE QTEPAKAQKI IEFDCRGLEF VEFKAEGEWL AEGAETSTKF TAIDLEEGEW 120
  121 FEYDEKSNEE VSINEIKWEM HQQSFKSLIM SLAEIPGTID FLTDAAHLLR TTAPETSAHL 180
  181 MSHRGNLLSQ FGVSPSDVQR QHVCGGCGLI MIPGQETILK LEARKSMRPK TKGKKSGINS 240
  241 TPKDNNEGPC KILHCDNCQR DTKIVFPAPA PAVRRKTAQN KVKKTVAPVE PPKQTSNASS 300
  301 KKRARNRKAG LQALLSGQKQ QSANPLSLSH FMK

Type	Start	End	Confidence
Signal Peptide	1	18	0.51
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	333	0.98